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1007件ヒットしました ( 1 - 50 )
検索条件   ビームライン(5A) and カテゴリ(Biological Science)
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No.成果管理番号課題番号ビームラインタイトル著者記述言語掲載誌名発表年掲載ページ
1240K-FHCM 2013G618; 2011G524 NW12A/NW12A; 5A/ 5A Characterization of two beta-decarboxylating dehydrogenases from Sulfolobus acidocaldarius Takahashi, Kento; Nakanishi, Fumika; Tomita, Takeo; Akiyama, Nagisa 英語 / English Extremophiles 2016 20 843
26AA1-VSH8 2011G524; 2013G618; 2015G552 5A/ 5A; NW12A/NW12A; NE3A/NE3A Structure and function of an ancestral-type β-decarboxylating dehydrogenase from Thermococcus kodakarensis. 清水 哲/Tetsu SHIMIZU; 富田 武郎/Takeo TOMITA; 西山 真/Makoto NISHIYAMA 英語 / English Biochemical Journal 2017 474 105
3F4WV-TZHR 2011G524; 2013G618 5A/ 5A; NW12A/NW12A Determinants of dual substrate specificity revealed by the crystal structure of homoisocitrate dehydrogenase from Thermus thermophilus in complex with homoisocitrate・Mg(2+)・NADH. 高橋 賢人/Kento TAKAHASHI; 富田 武郎/Takeo TOMITA; 西山 真/Makoto NISHIYAMA 英語 / English Biochemical and Biophysical Research Communications 2016 478 1688
49U4S-82UN 2011G525; 2013G619; 2015G552 5A/ 5A; NE3A/NE3A; NE3A/NE3A Lysine Biosynthesis of Thermococcus kodakarensis with the Capacity to Function as an Ornithine Biosynthetic System. 吉田 彩子/Ayako YOSHIDA; 富田 武郎/Takeo TOMITA; 西山 真/Makoto NISHIYAMA 英語 / English Journal of Biological Chemistry 2016 291 21630
5RJMT-0ARK 2011G525; 2013G619; 2015G552 5A/ 5A; NE3A/NE3A; NE3A/NE3A; NE3A/NE3A Crystal Structure of the LysY・LysW Complex from Thermus thermophilus. 清水 哲/Tetsu SHIMIZU; 富田 武郎/Takeo TOMITA; 西山 真/Makoto NISHIYAMA 英語 / English Journal of Biological Chemistry 2016 291 9948
6ZADM-GNAG 2011G524; 2013G618 5A/ 5A; NW12A/NW12A Crystal structure of the 2-iminoglutarate-bound complex of glutamate dehydrogenase from Corynebacterium glutamicum. 富田 武郎/Takeo TOMITA; 西山 真/Makoto NISHIYAMA 英語 / English FEBS Letters 2017 591 1611
727DF-6A93 2010G004; 2012G019; 2014G106 NW12A/NW12A; 5A/ 5A; NE3A/NE3A Structural insight into the CotB2-catalyzed cyclization of Geranylgeranyl Diphosphate to the Diterpene Cyclooctat-9-en-7-ol 富田 武郎/Takeo TOMITA; 葛山 智久/Tomohisa KUZUYAMA 英語 / English ACS Chemical Biology 2017 16 1621
8HS1G-5DT7 2011G525 5A/ 5A; NE3A/NE3A; NW12A/NW12A Crystal structure of LysK, an enzyme catalyzing the last step of lysine biosynthesis in Thermus thermophilus, in complex with lysine: Insight into the mechanism for recognition of the amino-group carrier protein, LysW. 富田 武郎/Takeo TOMITA; 吉田 彩子/Ayako YOSHIDA; 西山 真/Makoto NISHIYAMA 英語 / English Biochemical and Biophysical Research Communications 2017
9R5H0-CNGS 2014R-10; 2015R-17; 2016R-13 5A/ 5A; NE3A/NE3A; NW12A/NW12A Fosfomycin Biosynthesis via Transient Cytidylylation of 2-Hydroxyethylphosphonate by the Bifunctional Fom1 Enzyme 趙 秀煕/Suhee CHO; 富田 武郎/Takeo TOMITA 英語 / English ACS Chemical Biology 2017
10MKZ3-GU8P 2016G162 5A/ 5A; 17A/17A; NW12A/NW12A Structure and Mechanism of the Monoterpene Cyclolavandulyl Diphosphate Synthase that Catalyzes Consecutive Condensation and Cyclization 富田 武郎/Takeo TOMITA; 小林 正弥/Masaya KOBAYASHI; 葛山 智久/Tomohisa KUZUYAMA 英語 / English Angewandte Chemie-International Edition 2017
1188PY-1HFB 2013G013 5A/ 5A The interaction between the ribosomal stalk proteins and translation initiation factor 5B promotes translation initiation 村上 僚/Ryo MURAKAMI; Singh C. R. ; Morris J. ; Tang L. ; Harmon I. ; Takasu A. ; Miyoshi T. ; 伊東 孝祐/Kosuke ITO; Asano K. ; Uchiumi T. 英語 / English Molecular and Cellular Biology 2018 38 1
12KRAS-6WC1 2017G078 NW12A/NW12A; 5A/ 5A The ribosomal stalk protein is crucial for the action of the conserved ATPase ABCE1. Imai H; Abe T; Miyoshi T; Nishikawa SI; Ito K; Uchiumi T 英語 / English Nucleic Acids Research 2018 46 7820
134XXY-XWES 2017G078 5A/ 5A Switch of the interactions between the ribosomal stalk and EF1A in the GTP- and GDP-bound conformations Kei Maruyama; Hirotatsu Imai; Momoko Kawamura; Sonoko Ishino; Yoshizumi Ishino; Kosuke Ito; Toshio Uchiumi 英語 / English Scientific Reports 2019 9
148PDT-TGZN 2021G024 5A/ 5A Binding mode between peptidyl-tRNA hydrolase and the peptidyl-A76 moiety of the substrate 上原 祐二 / Yuji UEHARA; 松本 愛弥 / Ami MATSUMOTO; 中澤 智徳 / Tomonori NAKAZAWA; 福田 茜 / Akane FUKUTA; 安藤 香織 / Kaori ANDO; 内海 利男 / Toshio UCHIUMI; 岡 夏央 / Natsuhisa OKA; 伊東 孝祐/Kosuke ITO 英語 / English Journal of Biological Chemistry 2025 301 1
15ZTKR-MDBP 2009G156 5A/ 5A; 旧 6A/旧 6A Crystallization and preliminary X-ray data analysis of the pXO1 plasmid-partitioning factor TubZ from Bacillus cereus. 林 郁子/Ikuko HAYASHI; 真木 孝尚/Takahisa MAKI 英語 / English Acta Crystallographica Section F 2012 68 1550
16810S-WCSR 2018G648 NW12A/NW12A; 5A/ 5A The C-terminal region of the plasmid partitioning protein TubY is a tetramer that can bind membranes and DNA / III型プラスミド分配因子TubYは膜結合能をもつ 林 郁子/Ikuko HAYASHI 英語 / English Journal of Biological Chemistry 2020 295 17770
17UGD9-79K7 2017G574; 2019G548; 2021G672 5A/ 5A; NE3A/NE3A; NW12A/NW12A; 5A/ 5A; 17A/17A; NE3A/NE3A; 5A/ 5A; NE3A/NE3A Molecular Basis for Enzymatic Aziridine Formation via Sulfate Elimination 黒澤 菫/Sumire KUROSAWA; 吉田 彩子/Ayako YOSHIDA; 富田 武郎/Takeo TOMITA; 古園 さおり/Saori KOSONO; 西山 真/Makoto NISHIYAMA 英語 / English Journal of the American Chemical Society 2022 144 16164
18VF29-11ZZ 2017G574; 2019G548; 2021G672 5A/ 5A; NE3A/NE3A; NW12A/NW12A; 5A/ 5A; 17A/17A; NE3A/NE3A; 5A/ 5A; NE3A/NE3A Mechanisms of Sugar Aminotransferase-like Enzymes to Synthesize Stereoisomers of Non-proteinogenic Amino Acids in Natural Product Biosynthesis 黒澤 菫/Sumire KUROSAWA; 吉田 彩子/Ayako YOSHIDA; 富田 武郎/Takeo TOMITA; 古園 さおり/Saori KOSONO; 西山 真/Makoto NISHIYAMA 英語 / English ACS Chemical Biology 2023 18 385
19927S-UN18 2023G632 5A/ 5A; NE3A/NE3A Mechanistic Characterization of Diterpene Synthase Pairs for Tricyclic Diterpenes from Cyanobacteria Jiayi Yu; Taro Shiraishi; Kizerbo A. Taizoumbe; Yusaku Karasuno; 吉田 彩子/Ayako YOSHIDA; 西山 真/Makoto NISHIYAMA; Jeroen S. Dickschat; Tomohisa Kuzuyama 英語 / English Journal of the American Chemical Society 2025 147 11896
202M80-X1SY 2014R-22; 2012G001; 2013R-11; 2014G593 1A/1A; 5A/ 5A; 17A/17A; 1A/1A; 17A/17A; 5A/ 5A X-Ray Crystallographic Structure of RNase Po1 That Exhibits Antitumor Activity. Hiroko Kobayashi; Takuya Katsutani, Yumiko Hara, Naomi Motoyoshi, Tadashi Itagaki, Fusamichi Akita, Akifumi Higashiura, Yusuke Yamada, Norio Inokuchi and Mamoru Suzuki 英語 / English Biological & Pharmaceutical Bulletin 2014 37 968
2183T4-PZ06 2012G001; 2013R-11; 2014R-22; 2014G593; 2015R-16 5A/ 5A; 17A/17A; 1A/1A; 17A/17A; 1A/1A; 5A/ 5A; 17A/17A Effect of the Replacement of Aspartic Acid/glutamic Acid Residues with Asparagine/Glutamine Residues in RNase He1 from Hericium Erinaceus on Inhibition of Human Leukemia Cell Lineproliferation. Kobayashi H; Motoyoshi N, Itagaki T, Suzuki M, Inokuchi N. 英語 / English Bioscience Biotechnology and Biochemistry 2015 79 211
22XVFX-WTX9 2015G633; 2015R-27; 2014R-13 1A/1A; 5A/ 5A; NE3A/NE3A; NE3A/NE3A; NW12A/NW12A; 5A/ 5A; NE3A/NE3A Crystal structures of FMN-bound and FMN-free forms of dihydroorotate dehydrogenase from Trypanosoma brucei. 久保田 智巳/Tomomi KUBOTA 英語 / English FEBS Open Bio 2018 8 680
2351H5-55JP 2007G668; 2011G595 NW12A/NW12A; 5A/ 5A; NE3A/NE3A Structural similarities and differences in H-NS family proteins revealed by the N-terminal structure of TurB in Pseudomonas putida KT2440. Chiho Suzuki-Minakuchi; Kohei Kawazuma; Jun Matsuzawa; Delyana Vasileva; Zui Fujimoto; Tohru Terada; Kazunori Okada; Hideaki Nojiri 英語 / English FEBS Letters 2016 590 3583
24B86X-0Y67 2015G625 5A/ 5A; NE3A/NE3A; NW12A/NW12A The α- and β-Subunit Boundary at the Stem of the Mushroom-Like α3β3-Type Oxygenase Component of Rieske Non-Heme Iron Oxygenases Is the Rieske-Type Ferredoxin-Binding Site Pi-Cheng Tsai; Joydeep Chakraborty; 水口 千穂/Chiho MINAKUCHI; 野尻 秀昭/Hideaki NOJIRI 英語 / English Applied and Environmental Microbiology 2022 88
251VK7-0RWD 2014G550; 2012G529 5A/ 5A; NW12A/NW12A; NE3A/NE3A Crystal structure of thermophilic dextranase from Thermoanaerobacter pseudethanolicus 鈴木 喜大/Nobuhiro SUZUKI; 岸根 尚美 / Naomi Kishine; 藤本 瑞/Zui FUJIMOTO; 門間 充/Mitsuru MOMMA 英語 / English Journal of Biochemistry 2015 159 331
26D8CX-DG20 2013G655; 2015G638 5A/ 5A; NW12A/NW12A; NW12A/NW12A; NE3A/NE3A Optimized inhibition assays reveal different inhibitory responses of hydroxylamine oxidoreductases from beta- and gamma-proteobacterial ammonium-oxidizing bacteria. 西ヶ谷 有輝/Yuki NISHIGAYA; 藤本 瑞/Zui FUJIMOTO; 山崎 俊正 英語 / English Biochemical and Biophysical Research Communications 2016 476 127
27KGUE-CU4W 2016G055; 2014G038 NW12A/NW12A; 5A/ 5A Crystal structure of metagenomic β-xylosidase/ α-L-arabinofuranosidase activated by calcium. 松沢 智彦 / Tomohiko MATSUZAWA; 金子 哲 / Satoshi KANEKO; 岸根 尚美 / Naomi KISHINE; 藤本 瑞/Zui FUJIMOTO; 矢追 克郎 / Katsuro YAOI 英語 / English Journal of Biochemistry 2017 162 173
28AEYD-98HP 2019G561 5A Discovery of an antibiotic-related small protein of biocontrol strain Pseudomonas sp. Os17 by a genome-mining strategy. Kasumi Takeuchi; Wataru Tsuchiya; Zui Fujimoto 英語 / English Frontiers in Microbiology 2020 11 1
2946VY-YCH2 2017G119 NW12; 5A; NE3 Tetramer formation of Bacillus subtilis YabJ protein that belongs to YjgF/YER057c/UK114 family. Zui Fujimoto; Le Thi Thu Hong; Naomi Kishine; Nobuhiro Suzuki; Keitarou Kimura 英語 / English Bioscience Biotechnology and Biochemistry 2021 85 297
30KVTH-Y7CM 2015G552; 2017G574; 2019G548 NE3A/NE3A; 5A/ 5A; 5A/ 5A Involvement of subdomain II in the recognition of acetyl-CoA revealed by the crystal structure of homocitrate synthase from Sulfolobus acidocaldarius 鈴木 智大/Tomohiro SUZUKI; 富田 武郎/Takeo TOMITA; 平山 健太/Kenta HIRAYAMA; 西山 真/Makoto NISHIYAMA 英語 / English FEBS Journal 2021 288 1975
31MVUR-BAHA 2014G579 1A,5A Zwitterion-Immobilized Imprinted Polymers for Promoting the Crystallization of Proteins Zhongzhou CHEN/CHEN Zhongzhou 英語 / English Crystal Growth & Design 2015 4932
325VNV-6BEY 2014G579 1A/1A; 5A/ 5A Structural basis of reversible phosphorylation by maize pyruvate orthophosphate dikinase regulatory protein Zhongzhou CHEN / CHEN Zhongzhou; Lun JIANG; Yibo CHEN; Jiangge ZHEUG; Zhenhang CHEN; Yujie LIU; Ye TAO; Wei WU; Baichen WANG 英語 / English Plant Physiology 2016 170 732
33XJMU-580N 2014G579; 2016G631 5A/ 5A; 1A/1A; 1A/1A; 5A/ 5A Architecture of the Native Major Royal Jelly Protein 1 Oligomer CHEN Zhongzhou/Zhongzhou CHEN; WU Wei/Wei WU 英語 / English Nature Communications 2018 9 3373
34DHMD-N01T 2014G579; 2016G631 1A/1A; 5A/ 5A; 5A/ 5A; 1A/1A Structures of glycolate oxidase from Nicotiana benthamiana reveal a conserved pH sensor affecting the binding of FMN CHEN Zhongzhou/Zhongzhou CHEN; WU Wei/Wei WU 英語 / English Biochemical and Biophysical Research Communications 2018 503 3050
357941-SNYM 2015G717 5A/ 5A SRC2-3 binds to vitamin D receptor with high sensitivity and strong affinity Egawa DAICHI; 伊藤 俊将/Toshimasa ITOH; 加藤 晃/Akira KATO; Kataoka Saori; Yasuaki ANAMI; Keiko Yamamoto 英語 / English Bioorganic & Medicinal Chemistry 2017 25 568
36C7NB-6CFB 2013G656 5A/ 5A Fine tuning of agonistic/antagonistic activity for vitamin D receptor by 22-alkyl chain length of ligands: 22S-Hexyl compound unexpectedly restored agonistic activity 穴見 康昭/Yasuaki ANAMI; 酒巻 雄太; 伊藤 俊将/Toshimasa ITOH 英語 / English Bioorganic & Medicinal Chemistry 2015 23 7274
37Z6TT-M85T 2011G685 5A Structural basis for the selective inhibition of activated thrombin-activatable fibrinolysis inhibitor (TAFIa) by a selenium-containing inhibitor with chloro-aminopyridine as a basic group Itoh, Toshimasa; Yoshimoto, Nobuko; Hirano, Yoshinari; Yamamoto, Keiko 英語 / English Bioorganic & Medicinal Chemistry Letters 2018 28 2256
38WFCD-AH1F 2015G717, 2022G588; 2013G656 5A/ 5A; NW12A/NW12A; 5A/ 5A; NW12A/NW12A Covalent Modifier Discovery Using Hydrogen/Deuterium Exchange?Mass Spectrometry 小島 拓之/Hiroyuki KOJIMA; 柳 諒太 / Ryota Yanagi; 樋口愛理 / Eri Higuchi; 吉澤 麻美/Mami YOSHIZAWA; 下平 智之/ Tomoyuki Shimodaira; 熊谷 美咲 / Misaki Kumagai; 京谷 竜宏 / Tatsuhiro Kyoya; 関根 美夢 / Miyu Sekine; 江川 大地/Daichi EGAWA; 大橋 南美/Nami OHASHI; 石田 寛明/Hiroaki ISHIDA; 山本 恵子 / Keiko Yamamoto; 伊藤 俊将/Toshimasa ITOH 英語 / English Journal of Medicinal Chemistry 2023 66 4827
39MTK0-G0YN 2014G563 5A/ 5A; NW12A/NW12A Two Distinctive Binding Modes of Endonuclease Inhibitors to the N-Terminal Region of Influenza Virus Polymerase Acidic Subunit 不動 聡志/Satoshi FUDO; 額賀 路嘉/Michiyoshi NUKAGA; 星野 忠次/Tyuji HOSHINO; 山本 典生 / Norio YAMAMOTO; 小田切 孝人 / Takato ODAGIRI; 田代 眞人 / Masato TASHIRO 英語 / English Biochemistry 2016 55 2646
40EZ6F-N6HH 2014G563; 2016G554 5A/ 5A; NE3A/NE3A; NW12A/NW12A; 1A/1A Influence of precipitants on molecular arrangement and space group of protein crystals 不動 聡志/Satoshi FUDO; 額賀 路嘉/Michiyoshi NUKAGA; 星野 忠次/Tyuji HOSHINO 英語 / English Crystal Growth & Design 2017 17 534
41Y479-1A1S 2024G043 5A Design, synthesis and structural development of nonsecosteroidal VDR ligands based on the C,C′-diphenyl-m-carborane scaffold Hansaka Nirupama Thilakarathne Narasinghe Mudiyanselage 英語 / English European Journal of Medicinal Chemistry 2026 302
42GVMJ-0T23 2014G559 5A/ 5A Structural Insights into HIV-1 Vif-APOBEC3F Interaction 中島 雅晶/Masaaki NAKASHIMA; 粟津 宏昭/Hiroaki AWATSU; 渡邉 信久/Nobuhisa WATANABE; 大出 裕高 / Hirotaka ODE; 河村 高志 / Takashi KAWAMURA; 北村 紳悟 / Shingo KITAMURA; 長縄由里子 / Yuriko NAGANAWA; 都築 伸弥 / Shinya TSUZUKI; 松岡 和弘 / Kazuhiro MATSUOKA; 根本 理子 / Michiko NEMOTO; 蜂谷 敦子 / Atsuko HACHIYA; 杉浦 亙 / Wataru SUGIURA; 横幕 能行 / Yoshiyuki YOKOMAKU; 岩谷 靖雅 / Yasumasa IWATANI 英語 / English Journal of Virology 2016 90 1034
431FSE-G799 2015G645 1A/1A; 5A/ 5A Structural Study on the Reaction Mechanism of a Free Serine Kinase Involved in Cysteine Biosynthesis 永田 隆平/Ryuhei NAGATA; 藤橋 雅宏/Masahiro FUJIHASHI; Kawamura, Hiroki; Sato, Takaaki; Fujita, Takayuki; Atomi, Haruyuki; 三木 邦夫/Kunio MIKI 英語 / English ACS Chemical Biology 2017 12 1514
44DGWN-3B73 2015G645; 2017G696 1A; 5A; NE3A; 1A; 5A Identification of a pyrophosphate-dependent kinase and its donor selectivity determinants 永田 隆平/Ryuhei NAGATA; 藤橋 雅宏/Masahiro FUJIHASHI; Sato, Takaaki; Atomi, Haruyuki; 三木 邦夫/Kunio MIKI 英語 / English Nature Communications 2018 9
45111W-N5PT 2015G645; 2017G696 1A; 5A; 1A; 5A; NE3A; 17A Crystal structure and functional analysis of large-terpene synthases belonging to a newly found subclass 藤橋 雅宏/Masahiro FUJIHASHI; Sato, Tsutomu; Tanaka, Yuma; Yamamoto, Daisuke; Nishi, Tomoyuki; Ueda, Daijiro; Murakami, Mizuki; Yasuno, Yoko; Sekihara, Ai; Fuku, Kazuma; Shinada, Tesuro; 三木 邦夫/Kunio MIKI 英語 / English Chemical Science 2018 9 3754
46BNC3-VS20 2019G530; 2017G696; 2018RP-27; 2019RP-31 1A/1A; 5A; 17A; NE3A; 1A; 5A; 17A; NE3A; 1A/1A; 1A/1A; 17A/17A Characterization of Class IB Terpene Synthase: The First Crystal Structure Bound with a Substrate Surrogate Rafaella Stepanova; 稲木 隼人/Hayato INAGI; Kei Sugawara; Kazuya Asada; Tomoyuki Nishi; Daijiro Ueda; Yoko Yasuno; Tetsuro Shinada; 三木 邦夫/Kunio MIKI; 藤橋 雅宏/Masahiro FUJIHASHI; Tsutomu Sato 英語 / English ACS Chemical Biology 2020 15 1517
47G1SA-K74M 2019G530; 2019G531; 2018RP-27; 2019RP-31; 2020RP-09 1A/1A; 1A/1A; 1A/1A; 17A/17A; 1A/1A; 5A/ 5A Altering the Phosphorylation Position of Pyrophosphate-Dependent myo-Inositol-1-Kinase Based on Its Crystal Structure Ryo Tashiro; Takaaki Sato; Haruyuki Atomi; Kunio Miki; 藤橋 雅宏/Masahiro FUJIHASHI 英語 / English ACS Chemical Biology 2021 16 794
485HX9-EJWK 2009G088; 2011G010 5A/ 5A; NW12A/NW12A; 5A/ 5A; NE3A/NE3A; NW12A/NW12A Structural insights into the catalytic mechanism of cysteine (hydroxyl) lyase from the hydrogen-sulfide producing oral pathogen, Fusobacterium nucleatum 毛塚 雄一郎/Yuichiro KEZUKA; 石田 哲夫 / Tetsuo ISHIDA; 吉田 康夫/Yasuo YOSHIDA; 野中 孝昌 / Takamasa NONAKA 英語 / English Biochemical Journal 2018 475 733
49TEMX-TKDU 2016G092; 2017G595; 2018G060 1A/1A; 5A/ 5A; 17A/17A; NW12A/NW12A; 1A/1A; NE3A/NE3A; 1A/1A; NE3A/NE3A SDS-induced oligomerization of Lys49-phospholipase A 2 from snake venom 松井 崇/Takashi MATSUI; 鎌田   しずか/Shizuka KAMATA; Kentaro Ishii; Takahiro Maruno; Nouran Ghanem; Susumu Uchiyama; Koichi Kato; Atsuo Suzuki; Naoko Oda-Ueda; 小川 智久/Tomohisa OGAWA; 田中 良和/Yoshikazu TANAKA 英語 / English Scientific Reports 2019 9
50C5JB-VXTP 2017G595; 2018G048; 2019G535; 2021G507; 2023G511 1A/1A; 1A/1A; 1A/1A; 1A/1A; 5A/ 5A Structure?Activity Relationship of an All-α-helical Prenyltransferase Reveals the Mechanism of Indole Prenylation 大城 拓未/Takumi OSHIRO; Shuta Uehara; Arisa Suto; 田中 良和/Yoshikazu TANAKA; Takuya Ito; Yoshio Kodera; 松井 崇/Takashi MATSUI 英語 / English Biochemistry 2025 64 4196