| 1 | | ZGDZ-HA0E |
2017G088; 2017G089; 2018G043; 2019G017; 2019G018; 2020G021; 2020RP-04; 2021G052; 2022G034; 2023G052
|
5A/ 5A; NE3A/NE3A; NW12A/NW12A; 1A/1A; NE3A/NE3A; NW12A/NW12A; 5A/ 5A; NW12A/NW12A; 1A/1A; 5A/ 5A; NE3A/NE3A; NW12A/NW12A; 5A/ 5A; NE3A/NE3A; NW12A/NW12A; 1A/1A; 5A/ 5A; NE3A/NE3A; 1A/1A; 1A/1A; 5A/ 5A; 17A/17A; NW12A/NW12A; 1A/1A; 5A/ 5A; NE3A/NE3A; 17A/17A; NW12A/NW12A; NE3A/NE3A
|
Functional and structural analyses of a highly multifunctional enzyme TM1270 from the hyperthermophile Thermotoga maritima
|
新田 峻平/Shunpei NITTA; 伏信 進矢/Shinya FUSHINOBU
|
英語 / English
|
ACS Catalysis
|
2024
|
14
|
18817
|
| 2 | | CAC1-N2C6 |
2023G012; 2021G015
|
17A/17A; 17A/17A
|
Functional enhancement of flavin-containing monooxygenase through machine learning methodology
|
原 幸大/Kodai HARA; 橋本博
|
英語 / English
|
ACS Catalysis
|
2024
|
14
|
6945
|
| 3 | | 57UA-5TGA |
2023G612
|
17A/17A
|
Atomic Structure of a DNA-Stabilized Ag11 Nanocluster with Four Valence Electrons
|
近藤 次郎/Jiro KONDO
|
英語 / English
|
Advanced Optical Materials
|
2024
|
12
|
|
| 4 | | T7TJ-VTNV |
2022G596
|
17A/17A
|
Bayesian Inference for Model Analyses of Supramolecular Complexes: A Case Study with Nanocarbon Hosts
|
尾仲 柚香/Yuzuka ONAKA; Renki Sakai; 福永 隼也/Toshiya FUKUNAGA; 池本 晃喜/Koki IKEMOTO; Hiroyuki Isobe
|
英語 / English
|
Angewandte Chemie-International Edition
|
2024
|
63
|
|
| 5 | | CKCZ-XMV4 |
2014G087; 2014R-40; 2015G019; 2015G020; 2015R-36; 2016G083; 2016R-69
|
5A/ 5A; NE3A/NE3A; NW12A/NW12A; NW12A/NW12A; 5A/ 5A; NE3A/NE3A; NW12A/NW12A; 17A/17A; NE3A/NE3A; NW12A/NW12A; 1A/1A; NE3A/NE3A; 1A/1A; 5A/ 5A; NW12A/NW12A
|
Bifidobacterial GH146 β-L-arabinofuranosidase for the removal of β1,3-L-arabinofuranosides on plant glycans
|
丸山 瞬/Shun MARUYAMA; 伏信 進矢/Shinya FUSHINOBU
|
英語 / English
|
Applied Microbiology and Biotechnology
|
2024
|
108
|
|
| 6 | | 59BN-6UWE |
2007G552; 2009G512; 2011G504; 2013G506; 2015G534; 2017G610; 2019G518; 2021G508; 2023G617
|
NE3A/NE3A; NW12A/NW12A; 5A/ 5A; 17A(SPring-8)/17A(SPring-8); NE3A/NE3A; NW12A/NW12A; NE3A/NE3A; NW12A/NW12A; 5A/ 5A; NE3A/NE3A; NW12A/NW12A; 5A/ 5A; NW12A/NW12A; 5A/ 5A; 17A/17A; 5A/ 5A; NW12A/NW12A; 5A/ 5A; 5A/ 5A
|
L-rhamnose isomerase: a crucial enzyme for rhamnose catabolism and conversion of rare sugars
|
吉田 裕美/Hiromi YOSHIDA; Ken Izumori; Akihide Yoshihara
|
英語 / English
|
Applied Microbiology and Biotechnology
|
2024
|
108
|
|
| 7 | | E0VU-3MXJ |
|
17A
|
Molecular basis of ligand recognition specificity of flavone glucosyltransferases in Nemophila menziesii
|
Murayama, Kazutaka
|
英語 / English
|
Archives of Biochemistry and Biophysics
|
2024
|
753
|
|
| 8 | | 60PY-MHVF |
2016G012; 2017G514
|
17A/17A; 5A/ 5A
|
Structural basis for the full and partial agonist activities of retinoid X receptor α ligands with an iso-butoxy and an isopropyl group
|
沼本 修孝/Nobutaka NUMOTO
|
英語 / English
|
Biochemical and Biophysical Research Communications
|
2024
|
734
|
150617
|
| 9 | | 6V32-RXFA |
2021G015; 2023G012
|
17A/17A; 17A/17A
|
Structural and functional analyses of inhibition of human dihydroorotate dehydrogenase by antiviral furocoumavirin
|
原 幸大/Kodai HARA; 橋本博
|
英語 / English
|
Biochemistry
|
2024
|
63
|
1241
|
| 10 | | H8FP-JMK7 |
2022G642
|
17A
|
Development of Inhibitory Compounds for Metallo-beta-lactamase through Computational Design and Crystallographic Analysis
|
Kamo, Taichi
|
英語 / English
|
Biochemistry
|
2024
|
63
|
1278
|
| 11 | | UKGM-W46S |
2016G048, 2016R-19
|
1A, 17A
|
Unraveling the fastest myosin: Discovery history and structure-function relationships of algae Chara myosin XI
|
Kohji Ito
|
英語 / English
|
Biophysics and Physicobiology
|
2024
|
21
|
|
| 12 | | 2H5S-V575 |
2023G604
|
17A/17A
|
Molecular cylinders with donor?acceptor structure and swinging motion
|
佐藤 宗太/Sota SATO
|
英語 / English
|
Chemical Science
|
2024
|
15
|
18832
|
| 13 | | 0AEV-KCW6 |
2021G011; 2023G015
|
17A/17A; 17A/17A
|
Discovery and optimization of isoliquiritigenin as a death-associated protein kinase 1 inhibitor
|
横山 武司/Takeshi YOKOYAMA
|
英語 / English
|
European Journal of Medicinal Chemistry
|
2024
|
279
|
|
| 14 | | 40Y1-4JX8 |
2018G043; 2019G017; 2019G018; 2020G021; 2020RP-04; 2021G052; 2022G034; 2023G052
|
5A/ 5A; NW12A/NW12A; 1A/1A; 5A/ 5A; NE3A/NE3A; NW12A/NW12A; 5A/ 5A; NE3A/NE3A; NW12A/NW12A; 1A/1A; 5A/ 5A; NE3A/NE3A; 1A/1A; 1A/1A; 5A/ 5A; 17A/17A; NW12A/NW12A; 1A/1A; 5A/ 5A; 17A/17A; NE3A/NE3A; NW12A/NW12A; NE3A/NE3A
|
Crystal structure of β-D-galactofuranosidase from Streptomyces sp. JHA19 in complex with an inhibitor provides insights into substrate specificity
|
藤尾 則揮/Noriki FUJIO; 山田 千早/Chihaya YAMADA; ブランパン 騰真/Toma BLANPAIN; 伏信 進矢/Shinya FUSHINOBU
|
英語 / English
|
FEBS Letters
|
2024
|
598
|
2866
|
| 15 | | X240-7U48 |
2019G016; 2021G011
|
17A/17A; 17A/17A
|
SIRT5 mutants reveal the role of conserved asparagine and glutamine residues in the NAD+-binding pocket
|
横山 武司/Takeshi YOKOYAMA
|
英語 / English
|
FEBS Letters
|
2024
|
598
|
2269
|
| 16 | | GXYW-G7JF |
2018G505; 2019RP-03
|
5A/ 5A; 17A/17A; NE3A/NE3A; NW12A/NW12A; 5A/ 5A; 17A/17A
|
Cysteine-Persulfide Sulfane Sulfur-Ligated Zn Complex of Sulfur-Carrying SufU in the SufCDSUB System for Fe-S Cluster Biosynthesis
|
Takuya Terahata; Yukino Shimada; Chisato Maki; 室賀 直来/Suguru MUROGA; Rina Sakurai; Kouhei Kunichika; 藤城 貴史/Takashi FUJISHIRO
|
英語 / English
|
Inorganic Chemistry
|
2024
|
63
|
19607
|
| 17 | | 3T77-2FNU |
2022G096
|
17A/17A
|
Crystal structure of the complex of CLEC12A and an antibody that interferes with binding of diverse ligands
|
Shotaro Mori; 長江 雅倫/Masamichi NAGAE; Sho Yamasaki
|
英語 / English
|
International Immunology
|
2024
|
36
|
279
|
| 18 | | PNBE-NTZ9 |
2019G075; 2019G595
|
1A/1A; 17A/17A
|
Structural dynamics of the Ca2+-regulated cutinase towards structure-based improvement of PET degradation activity
|
沼本 修孝/Nobutaka NUMOTO
|
英語 / English
|
International Journal of Biological Macromolecules
|
2024
|
281
|
136597
|
| 19 | | V6MV-BMUU |
2012G048; 2014G087; 2015G019; 2015G020; 2015R-36; 2016G083; 2016R-69; 2019G018; 2022G034
|
17A/17A; NE3A/NE3A; NW12A/NW12A; 5A/ 5A; NE3A/NE3A; NW12A/NW12A; 5A/ 5A; NE3A/NE3A; NW12A/NW12A; 17A/17A; NE3A/NE3A; NW12A/NW12A; 1A/1A; NE3A/NE3A; 1A/1A; 5A/ 5A; NW12A/NW12A; 1A/1A; 17A/17A; 5A/ 5A; NE3A/NE3A; NW12A/NW12A; 1A/1A; 5A/ 5A; 17A/17A; NE3A/NE3A; NW12A/NW12A
|
Crystal structure of Bifidobacterium bifidum glycoside hydrolase family 110 α-galactosidase specific for blood group B antigen
|
ブランパン 騰真/Toma BLANPAIN; 赤間 恵/Megumi AKAMA; 荒川 孝俊/Takatoshi ARAKAWA; 伏信 進矢/Shinya FUSHINOBU
|
英語 / English
|
Journal of Applied Glycoscience
|
2024
|
71
|
81
|
| 20 | | PEYB-5DW1 |
2019G017; 2019G018; 2020G021; 2020RP-04; 2021G052; 2022G034; 2023G052
|
1A/1A; 5A/ 5A; NE3A/NE3A; NW12A/NW12A; 5A/ 5A; NE3A/NE3A; NW12A/NW12A; 1A/1A; 5A/ 5A; NE3A/NE3A; 1A/1A; 1A/1A; 5A/ 5A; 17A/17A; NW12A/NW12A; 1A/1A; 5A/ 5A; 17A/17A; NE3A/NE3A; NW12A/NW12A; NE3A/NE3A
|
Protocatechuate hydroxylase is a novel group A flavoprotein monooxygenase with a unique substrate recognition mechanism
|
福島 陸/Riku FUKUSHIMA; 山田 千早/Chihaya YAMADA; 荒川 孝俊/Takatoshi ARAKAWA; 伏信 進矢/Shinya FUSHINOBU
|
英語 / English
|
Journal of Biological Chemistry
|
2024
|
300
|
|
| 21 | | T43C-9KD7 |
2017G142; 2019G080
|
5A/ 5A; 17A/17A; 5A/ 5A; 17A/17A
|
Racemization of the substrate and product by serine palmitoyltransferase from Sphingobacterium multivorum yields two enantiomers of the product from D-serine
|
宮原 郁子/Ikuko MIYAHARA; 生城浩子; 神谷信夫; 矢野貴人
|
英語 / English
|
Journal of Biological Chemistry
|
2024
|
300
|
|
| 22 | | JCY7-6ZTW |
2021G015
|
17A/17A
|
Structural basis for intra- and inter-molecular interactions on RAD9 subunit of 9-1-1 checkpoint clamp implies functional 9-1-1 regulation by RHINO
|
Kodai Hara; Hiroshi Hashimoto
|
英語 / English
|
Journal of Biological Chemistry
|
2024
|
300
|
|
| 23 | | R7YM-RAEM |
2012G550; 2013G506; 2015G534; 2017G610; 2019G518; 2021G508; 2023G617
|
NE3A/NE3A; 5A/ 5A; NE3A/NE3A; NW12A/NW12A; 5A/ 5A; NW12A/NW12A; 5A/ 5A; 17A/17A; 5A/ 5A; NW12A/NW12A; 5A/ 5A; 5A/ 5A
|
Improvement of substrate specificity of the direct electron transfer type FAD-dependent glucose dehydrogenase catalytic subunit
|
Joseph A Kerrigan Jr; 吉田 裕美/Hiromi YOSHIDA; Koji Sode
|
英語 / English
|
Journal of Biotechnology
|
2024
|
395
|
170
|
| 24 | | 5V36-NMBE |
2017G554; 2019G592
|
17A/17A; 1A/1A; 17A/17A
|
Interaction of Cephalosporins with Human Serum Albumin: A Structural Study
|
河合 聡人/Akito KAWAI
|
英語 / English
|
Journal of Medicinal Chemistry
|
2024
|
67
|
14175
|
| 25 | | CG0S-D2XB |
2019G016; 2021G011
|
17A/17A; 17A/17A
|
Development of Benziodarone Analogues with Enhanced Potency for Selective Binding to Transthyretin in Human Plasma
|
Mineyuki Mizuguchi
|
英語 / English
|
Journal of Medicinal Chemistry
|
2024
|
67
|
6987
|
| 26 | | VHB5-HP16 |
|
17A
|
Optimization Efforts for Identification of Novel Highly Potent Keap1-Nrf2 Protein-Protein Interaction Inhibitors
|
Otake, Kazuki
|
英語 / English
|
Journal of Medicinal Chemistry
|
2024
|
67
|
3741
|
| 27 | | MHHA-TGCG |
|
17A
|
Crystal Structure of p97 N-D1 Hexamer in Complex with p47 UBX Domain
|
Nguyen T. Q.
|
英語 / English
|
Journal of the Korean Chemical Society
|
2024
|
68
|
25
|
| 28 | | 3GPU-SZYH |
2020G056, 2022G005
|
17A, 5A
|
An ancestral fold reveals the evolutionary link between RNA polymerase and ribosomal proteins
|
Yagi, Sota
|
英語 / English
|
Nature Communications
|
2024
|
15
|
|
| 29 | | JHZD-H07X |
2020RP-08
|
17A/17A
|
Synthesis of 2'-formamidonucleoside phosphoramidites for suppressing the seed-based off-target effects of siRNAs
|
近藤 次郎/Jiro KONDO
|
英語 / English
|
Nucleic Acids Research
|
2024
|
52
|
|
| 30 | | 94CC-30H3 |
|
17A
|
Substrate specificity of Mycobacterium tuberculosis tRNA terminal nucleotidyltransferase toxin MenT3
|
Liu, Jun
|
英語 / English
|
Nucleic Acids Research
|
2024
|
52
|
5987
|
| 31 | | M605-0G80 |
2021G589; 2023G604
|
17A/17A; 17A/17A
|
Cyclic Sesquiterpene?Flavanone [4+2] Hybrids, Syzygioblanes A?C, Found in an Indonesian Traditional Medicine, “Jampu Salo” (Syzygium oblanceolatum)
|
佐藤 宗太/Sota SATO
|
英語 / English
|
Organic Letters
|
2024
|
26
|
4302
|
| 32 | | J1U3-GA3F |
2019G017; 2019G018; 2020G021; 2021G052; 2022G034; 2023G052
|
1A/1A; 5A/ 5A; NE3A/NE3A; NW12A/NW12A; 5A/ 5A; NE3A/NE3A; NW12A/NW12A; 1A/1A; 5A/ 5A; NE3A/NE3A; 1A/1A; 5A/ 5A; 17A/17A; NW12A/NW12A; 1A/1A; 5A/ 5A; 17A/17A; NE3A/NE3A; NW12A/NW12A; NE3A/NE3A
|
Cytosolic UDP-L-arabinose synthesis by bifunctional UDP-glucose 4-epimerases in Arabidopsis
|
松本 真由子/Mayuko MATSUMOTO; 伏信 進矢/Shinya FUSHINOBU
|
英語 / English
|
Plant Journal
|
2024
|
119
|
508
|
| 33 | | 3R2M-DMSD |
2023G036
|
5A/ 5A; 17A/17A; AR-NE3A
|
TIFAB regulates the TIFA?TRAF6 signaling pathway involved in innate immunity by forming a heterodimer complex with TIFA
|
中村 照也/Teruya NAKAMURA
|
英語 / English
|
Proceedings of the National Academy of Sciences of the United States of America
|
2024
|
121
|
|
| 34 | | CE5G-61RC |
2020G514
|
5A/ 5A; 17A/17A; NW12A/NW12A
|
Structural insights into the recognition of tetrapyrrole substrates by ancestral class II chelatase CfbA
|
小川 翔子/Shoko OGAWA; Masahide Hikita; 藤城 貴史/Takashi FUJISHIRO
|
英語 / English
|
Protein Science
|
2024
|
33
|
|
| 35 | | C3Z9-UGT3 |
2022G517
|
17A/17A
|
Biophysical insights into the dimer formation of human Sirtuin 2
|
小沼 剛/Tsuyoshi KONUMA
|
英語 / English
|
Protein Science
|
2024
|
33
|
1
|
| 36 | | YYD1-P1YK |
2021G638
|
1A/1A; 17A/17A
|
THOUSAND-GRAIN WEIGHT 6, which is an IAA-glucose hydrolase, preferentially recognizes the structure of the indole ring
|
Tatsuki Akabane; Nobuhiro Suzuki; Kazuyoshi Ikeda; Tomoki Yonezawa; Satoru Nagatoishi; Hiroyoshi Matsumura; Takuya Yoshizawa; Wataru Tsuchiya; Satoshi Kamino; Kouhei Tsumoto; Ken Ishimaru; Etsuko Katoh; Naoki Hirotsu
|
英語 / English
|
Scientific Reports
|
2024
|
14
|
|
| 37 | | 4RDU-MV1Z |
2017G561
|
1A/1A; 5A/ 5A; 17A/17A
|
Protonation/deprotonation-driven switch for the redox stability of low-potential [4Fe-4S] ferredoxin
|
海野 昌喜/Masaki UNNO
|
英語 / English
|
eLife
|
2024
|
|
|
| 38 | | MYRA-9EP6 |
|
17A
|
Sld3CBD?Cdc45 structural insights into Cdc45 recruitment for CMG complex formation during DNA replication
|
Hao Li
|
英語 / English
|
eLife
|
2024
|
13
|
|
| 39 | | 284A-7YFW |
2017G554; 2019G592
|
17A/17A; 1A/1A; 17A/17A
|
Structural insights into the molecular mechanism of high-level ceftazidime-avibactam resistance conferred by CMY-185
|
河合 聡人/Akito KAWAI
|
英語 / English
|
mBio
|
2024
|
15
|
|
